Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cops6O88545 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.38□□□□□ -0.11
Cops6O88545 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.38□□□□□ -0.11
Cops6O88545 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.38□□□□□ -0.11
Cops6O88545 Gm11960-201ENSMUST00000122068 925 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gm7741-201ENSMUST00000181445 989 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.38□□□□□ -0.11
Cops6O88545 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.38□□□□□ -0.11
Cops6O88545 Gm3793-201ENSMUST00000204973 672 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cops6O88545 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.38□□□□□ -0.11
Cops6O88545 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops6O88545 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.37□□□□□ -0.11
Cops6O88545 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Cops6O88545 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cops6O88545 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.37□□□□□ -0.11
Cops6O88545 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.37□□□□□ -0.11
Cops6O88545 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Gm22442-201ENSMUST00000157256 144 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Gm37826-201ENSMUST00000195329 322 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cops6O88545 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.37□□□□□ -0.11
Cops6O88545 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Gm23680-201ENSMUST00000083162 164 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cops6O88545 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops6O88545 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cops6O88545 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Cops6O88545 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.37□□□□□ -0.11
Cops6O88545 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops6O88545 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.36□□□□□ -0.11
Cops6O88545 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms