Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col5a1O88207 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm14270-201ENSMUST00000118388 846 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.54□□□□□ -0.72
Col5a1O88207 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.54□□□□□ -0.72
Col5a1O88207 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm29808-201ENSMUST00000194419 468 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm39288-201ENSMUST00000210554 446 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col5a1O88207 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col5a1O88207 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col5a1O88207 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm16459-201ENSMUST00000121443 686 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.54□□□□□ -0.72
Col5a1O88207 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm24809-201ENSMUST00000175318 271 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm43002-201ENSMUST00000200310 155 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.54□□□□□ -0.72
Col5a1O88207 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.54□□□□□ -0.72
Col5a1O88207 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col5a1O88207 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col5a1O88207 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.53□□□□□ -0.72
Col5a1O88207 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Col5a1O88207 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Col5a1O88207 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.53□□□□□ -0.72
Col5a1O88207 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.53□□□□□ -0.72
Col5a1O88207 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm11500-201ENSMUST00000118237 601 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm9162-201ENSMUST00000182081 991 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Col5a1O88207 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 Gm43380-201ENSMUST00000200421 220 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.53□□□□□ -0.72
Col5a1O88207 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.53□□□□□ -0.72
Col5a1O88207 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Col5a1O88207 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col5a1O88207 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms