Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.31□□□□□ -0.44
Ttc3O88196 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ttc3O88196 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ttc3O88196 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ttc3O88196 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ttc3O88196 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.31□□□□□ -0.44
Ttc3O88196 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ttc3O88196 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc3O88196 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm25148-201ENSMUST00000104611 123 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.3□□□□□ -0.44
Ttc3O88196 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.3□□□□□ -0.44
Ttc3O88196 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm42657-201ENSMUST00000201746 211 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ttc3O88196 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm13182-201ENSMUST00000122241 312 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Gm25072-201ENSMUST00000175233 235 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.3□□□□□ -0.44
Ttc3O88196 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ttc3O88196 Paupar-201ENSMUST00000194826 3482 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.3□□□□□ -0.44
Ttc3O88196 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc3O88196 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ttc3O88196 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ttc3O88196 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.29□□□□□ -0.44
Ttc3O88196 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.29□□□□□ -0.44
Ttc3O88196 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 Mir6998-201ENSMUST00000183343 64 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.29□□□□□ -0.44
Ttc3O88196 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ttc3O88196 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.29□□□□□ -0.44
Ttc3O88196 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Ttc3O88196 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ttc3O88196 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ttc3O88196 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc3O88196 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms