Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm12501-201ENSMUST00000119163 529 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm18734-201ENSMUST00000172937 808 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm8815-201ENSMUST00000173809 620 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm28686-201ENSMUST00000187404 609 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.72□□□□□ -0.53
Pdlim1O70400 Rps4l-202ENSMUST00000204242 789 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.72□□□□□ -0.53
Pdlim1O70400 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim1O70400 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Gm24891-201ENSMUST00000104391 136 ntBASIC11.71□□□□□ -0.53
Pdlim1O70400 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.71□□□□□ -0.53
Pdlim1O70400 Gm12217-201ENSMUST00000118858 696 ntBASIC11.71□□□□□ -0.53
Pdlim1O70400 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pdlim1O70400 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.71□□□□□ -0.53
Pdlim1O70400 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.71□□□□□ -0.53
Pdlim1O70400 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim1O70400 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.71□□□□□ -0.53
Pdlim1O70400 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.71□□□□□ -0.54
Pdlim1O70400 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim1O70400 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pdlim1O70400 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim1O70400 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim1O70400 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pdlim1O70400 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.71□□□□□ -0.54
Pdlim1O70400 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim1O70400 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.71□□□□□ -0.54
Pdlim1O70400 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim1O70400 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm23200-201ENSMUST00000104379 132 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm11700-201ENSMUST00000119409 403 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm26047-201ENSMUST00000157308 113 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm28937-201ENSMUST00000185413 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm29400-201ENSMUST00000187208 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm28662-201ENSMUST00000188446 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm28251-201ENSMUST00000188835 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm37318-201ENSMUST00000194325 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm38017-201ENSMUST00000194768 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm37287-201ENSMUST00000195449 695 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm37793-201ENSMUST00000195548 695 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms