Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm10169-201ENSMUST00000121822 348 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm18561-201ENSMUST00000206027 804 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm17825-201ENSMUST00000206836 794 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm5805-201ENSMUST00000072779 456 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.99□□□□□ -0.33
Trdmt1O55055 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trdmt1O55055 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdmt1O55055 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trdmt1O55055 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm14395-201ENSMUST00000120494 563 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.98□□□□□ -0.33
Trdmt1O55055 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm42816-201ENSMUST00000198433 325 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm3726-201ENSMUST00000203110 785 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm18059-201ENSMUST00000208073 580 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.98□□□□□ -0.33
Trdmt1O55055 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.98□□□□□ -0.33
Trdmt1O55055 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.98□□□□□ -0.33
Trdmt1O55055 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdmt1O55055 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm11801-201ENSMUST00000117807 746 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms