Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm10608-202ENSMUST00000213924 676 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Gm30285-201ENSMUST00000214614 422 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Dopey2-207ENSMUST00000227156 7340 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smarce1O54941 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm11511-201ENSMUST00000118146 540 ntBASIC14.01□□□□□ -0.17
Smarce1O54941 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Gm3096-201ENSMUST00000185770 364 ntBASIC14.01□□□□□ -0.17
Smarce1O54941 Gm37424-201ENSMUST00000191727 561 ntBASIC14.01□□□□□ -0.17
Smarce1O54941 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smarce1O54941 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarce1O54941 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smarce1O54941 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14□□□□□ -0.17
Smarce1O54941 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14□□□□□ -0.17
Smarce1O54941 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Olfr284-202ENSMUST00000206647 966 ntBASIC14□□□□□ -0.17
Smarce1O54941 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gm38055-201ENSMUST00000195353 2217 ntBASIC14□□□□□ -0.17
Smarce1O54941 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smarce1O54941 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarce1O54941 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarce1O54941 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.99□□□□□ -0.17
Smarce1O54941 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarce1O54941 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smarce1O54941 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smarce1O54941 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms