Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc1a6O35544 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc1a6O35544 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc1a6O35544 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Slc1a6O35544 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm12390-201ENSMUST00000117897 397 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm7722-201ENSMUST00000120646 741 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm42627-201ENSMUST00000197347 224 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Slc1a6O35544 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.62□□□□□ -0.55
Slc1a6O35544 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Slc1a6O35544 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc1a6O35544 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.62□□□□□ -0.55
Slc1a6O35544 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Slc1a6O35544 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.61□□□□□ -0.55
Slc1a6O35544 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.61□□□□□ -0.55
Slc1a6O35544 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc1a6O35544 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms