Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm37365-201ENSMUST00000193109 409 ntBASIC17.85■□□□□ 0.45
Polr1aO35134 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gm2448-201ENSMUST00000207080 559 ntBASIC17.85■□□□□ 0.45
Polr1aO35134 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC17.85■□□□□ 0.45
Polr1aO35134 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Polr1aO35134 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gm9244-201ENSMUST00000056767 2129 ntBASIC17.85■□□□□ 0.45
Polr1aO35134 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Polr1aO35134 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm6158-201ENSMUST00000109467 904 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm11996-201ENSMUST00000117538 915 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm19013-201ENSMUST00000183895 1222 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm19014-201ENSMUST00000184828 1189 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC17.84■□□□□ 0.45
Polr1aO35134 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.84■□□□□ 0.45
Polr1aO35134 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Polr1aO35134 Nudt13-207ENSMUST00000224311 1574 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm13981-201ENSMUST00000122360 447 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Mrip-ps-201ENSMUST00000184613 940 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm31274-201ENSMUST00000197356 229 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm42867-201ENSMUST00000202995 469 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Gm4903-201ENSMUST00000210462 405 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 AC158388.3-202ENSMUST00000225517 775 ntBASIC17.84■□□□□ 0.45
Polr1aO35134 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr1aO35134 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Polr1aO35134 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Polr1aO35134 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC17.84■□□□□ 0.45
Polr1aO35134 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr1aO35134 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr1aO35134 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Polr1aO35134 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Polr1aO35134 Gm25343-201ENSMUST00000157460 107 ntBASIC17.83■□□□□ 0.44
Polr1aO35134 Gm17221-201ENSMUST00000163909 481 ntBASIC17.83■□□□□ 0.44
Polr1aO35134 Gm17073-201ENSMUST00000168069 556 ntBASIC17.83■□□□□ 0.44
Polr1aO35134 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Polr1aO35134 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC17.83■□□□□ 0.44
Polr1aO35134 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC17.83■□□□□ 0.44
Polr1aO35134 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC17.83■□□□□ 0.44
Polr1aO35134 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr1aO35134 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Polr1aO35134 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Gm13135-201ENSMUST00000117628 3121 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms