Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Mir6923-201ENSMUST00000184592 72 ntBASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm37284-201ENSMUST00000193607 539 ntBASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm43671-201ENSMUST00000200422 433 ntBASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm43912-201ENSMUST00000204352 538 ntBASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm6390-201ENSMUST00000215034 589 ntBASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm15036-201ENSMUST00000118880 400 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm17214-201ENSMUST00000164501 541 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm17192-201ENSMUST00000169031 511 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
B020004C17RikJ3QP07 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm14274-201ENSMUST00000117182 615 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm12218-201ENSMUST00000117666 399 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm13445-201ENSMUST00000121664 307 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm18201-201ENSMUST00000174735 875 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm42599-201ENSMUST00000201308 469 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B020004C17RikJ3QP07 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms