Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm11511-201ENSMUST00000118146 540 ntBASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm5070-201ENSMUST00000177599 862 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm43758-201ENSMUST00000199500 367 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm45598-202ENSMUST00000210719 986 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Olfr582-201ENSMUST00000098212 960 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh9F8VPK8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Pcdh9F8VPK8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Rgr-203ENSMUST00000225070 4704 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm11930-201ENSMUST00000117788 190 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm10254-201ENSMUST00000052888 867 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm5455-201ENSMUST00000058710 715 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms