Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc188F6WEU2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc188F6WEU2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Ccdc188F6WEU2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Ccdc188F6WEU2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm24933-201ENSMUST00000103762 110 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm23252-201ENSMUST00000103776 110 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm15610-201ENSMUST00000120584 195 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm11952-201ENSMUST00000121172 821 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm26443-201ENSMUST00000179610 110 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Mir7051-201ENSMUST00000184167 73 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Wbp1-209ENSMUST00000205023 716 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm18001-201ENSMUST00000212023 688 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc188F6WEU2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Acot6-202ENSMUST00000222921 3622 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Mir598-201ENSMUST00000102094 79 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm11473-201ENSMUST00000118980 359 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm11544-201ENSMUST00000120215 382 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm15329-201ENSMUST00000121408 155 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc188F6WEU2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms