Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC158519.1-201ENSMUST00000228615 179 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm26132-201ENSMUST00000083166 148 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm16410-201ENSMUST00000094550 774 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm14156-201ENSMUST00000121538 483 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm9192-201ENSMUST00000183221 985 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm4891-201ENSMUST00000182279 912 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a3E9PWQ3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gm21054-201ENSMUST00000203981 380 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gm9619-201ENSMUST00000211587 762 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Gm12745-201ENSMUST00000121767 214 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms