Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm5449-201ENSMUST00000081132 357 ntBASIC11.94□□□□□ -0.5
Col4a6B1AVK5 Gm25580-201ENSMUST00000083409 327 ntBASIC11.94□□□□□ -0.5
Col4a6B1AVK5 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm6158-201ENSMUST00000109467 904 ntBASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm45094-201ENSMUST00000207013 617 ntBASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a6B1AVK5 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gm26368-201ENSMUST00000157826 118 ntBASIC11.92□□□□□ -0.5
Col4a6B1AVK5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gm24954-201ENSMUST00000178831 110 ntBASIC11.92□□□□□ -0.5
Col4a6B1AVK5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.92□□□□□ -0.5
Col4a6B1AVK5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a6B1AVK5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms