Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm14699-201ENSMUST00000122340 228 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm14148-201ENSMUST00000122433 1008 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm26379-201ENSMUST00000178125 138 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm23458-201ENSMUST00000083257 169 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm17221-201ENSMUST00000163909 481 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm17073-201ENSMUST00000168069 556 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm26931-201ENSMUST00000182273 609 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm43103-201ENSMUST00000199021 802 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms