Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm15370-201ENSMUST00000117158 253 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm12742-201ENSMUST00000117326 410 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm12036-201ENSMUST00000120008 530 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm24845-201ENSMUST00000158034 109 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm29396-201ENSMUST00000185659 716 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 AY702102-202ENSMUST00000194651 1173 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm7046-201ENSMUST00000221351 977 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm13786-201ENSMUST00000122371 333 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm17420-201ENSMUST00000164753 153 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm26956-201ENSMUST00000182176 986 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm18054-201ENSMUST00000207539 555 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms