Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm43118-201ENSMUST00000199149 775 ntBASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm5950-201ENSMUST00000213337 772 ntBASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H2afb3S4R1G7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm11531-201ENSMUST00000117614 555 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm24845-201ENSMUST00000158034 109 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm38158-201ENSMUST00000194617 339 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm19309-201ENSMUST00000218295 205 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm7046-201ENSMUST00000221351 977 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms