Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cldn9Q9Z0S7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm45331-201ENSMUST00000209868 554 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm2553-201ENSMUST00000215986 605 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm5705-201ENSMUST00000066241 711 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cldn9Q9Z0S7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm37259-201ENSMUST00000193903 849 ntBASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm45224-201ENSMUST00000208203 414 ntBASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms