Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcb1Q9Z0H3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm44126-201ENSMUST00000204831 514 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm9463-201ENSMUST00000206707 601 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms