Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Pck2-205ENSMUST00000226352 2784 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm44315-201ENSMUST00000203041 219 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn8aQ9WTU3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scn8aQ9WTU3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scn8aQ9WTU3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm12029-201ENSMUST00000120073 832 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm23771-201ENSMUST00000178702 110 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Mir1956-201ENSMUST00000157748 65 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms