Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Mir6941-201ENSMUST00000184711 59 ntBASIC13.83□□□□□ -0.2
Scn11aQ9R053 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Gm6644-201ENSMUST00000186507 951 ntBASIC13.83□□□□□ -0.2
Scn11aQ9R053 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.83□□□□□ -0.2
Scn11aQ9R053 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.83□□□□□ -0.2
Scn11aQ9R053 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn11aQ9R053 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm13351-201ENSMUST00000118087 414 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm14213-201ENSMUST00000119778 768 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm44008-201ENSMUST00000204345 412 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn11aQ9R053 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.82□□□□□ -0.2
Scn11aQ9R053 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm11578-201ENSMUST00000118530 459 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm3329-201ENSMUST00000159873 556 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm11619-201ENSMUST00000117474 237 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm22146-201ENSMUST00000157397 288 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm26134-201ENSMUST00000178484 110 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm5599-201ENSMUST00000209602 788 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Gm5468-202ENSMUST00000227851 682 ntBASIC13.81□□□□□ -0.2
Scn11aQ9R053 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn11aQ9R053 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms