Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm26956-201ENSMUST00000182176 986 ntBASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm10312-201ENSMUST00000078515 489 ntBASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ercc4Q9QZD4 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ercc4Q9QZD4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ercc4Q9QZD4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms