Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm8885-201ENSMUST00000189382 598 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm44967-201ENSMUST00000207047 631 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a2Q9JLR1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm14109-201ENSMUST00000118814 309 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 AA914427-201ENSMUST00000193194 1166 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm45224-201ENSMUST00000208203 414 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gzmn-202ENSMUST00000225535 989 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms