Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ldb3Q9JKS4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm11700-201ENSMUST00000119409 403 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm17040-202ENSMUST00000170597 889 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm27552-201ENSMUST00000183351 62 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm27844-201ENSMUST00000183613 62 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm28450-201ENSMUST00000187349 638 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm6450-201ENSMUST00000200896 574 ntBASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ldb3Q9JKS4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm15515-201ENSMUST00000117827 822 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm7857-201ENSMUST00000117957 358 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm8566-201ENSMUST00000120174 465 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm25881-201ENSMUST00000157783 103 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm28937-201ENSMUST00000185413 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm29400-201ENSMUST00000187208 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm28662-201ENSMUST00000188446 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm28251-201ENSMUST00000188835 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm37318-201ENSMUST00000194325 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm38017-201ENSMUST00000194768 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm37287-201ENSMUST00000195449 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm37793-201ENSMUST00000195548 695 ntBASIC10.71□□□□□ -0.69
Ldb3Q9JKS4 Gm38314-201ENSMUST00000195709 625 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms