Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm15703-201ENSMUST00000120250 880 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mir1895-201ENSMUST00000122615 79 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm27494-201ENSMUST00000184735 189 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco4Q9JIS3 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.42□□□□□ -0.9
Smco4Q9JIS3 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm43125-201ENSMUST00000201724 730 ntBASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Nln-205ENSMUST00000224945 2486 ntBASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco4Q9JIS3 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms