Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3bQ9ES34 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ube3bQ9ES34 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3bQ9ES34 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3bQ9ES34 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm22334-201ENSMUST00000158070 133 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm44506-201ENSMUST00000206278 965 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3bQ9ES34 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Ube3bQ9ES34 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Ube3bQ9ES34 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm15573-201ENSMUST00000119487 540 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm4726-201ENSMUST00000135604 736 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm6019-201ENSMUST00000148369 736 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm15881-201ENSMUST00000148792 942 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm26047-201ENSMUST00000157308 113 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm26047-202ENSMUST00000198840 115 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm18377-201ENSMUST00000215141 607 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ube3bQ9ES34 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Gm11700-201ENSMUST00000119409 403 ntBASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Gm18367-201ENSMUST00000176139 600 ntBASIC14.07□□□□□ -0.16
Ube3bQ9ES34 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Gm45574-201ENSMUST00000210921 331 ntBASIC14.07□□□□□ -0.16
Ube3bQ9ES34 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.07□□□□□ -0.16
Ube3bQ9ES34 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms