Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm23064-201ENSMUST00000179866 101 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm42430-201ENSMUST00000197209 616 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm5468-202ENSMUST00000227851 682 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-4Q9EQM3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25554-201ENSMUST00000158075 113 ntBASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm44216-201ENSMUST00000203942 157 ntBASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms