Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm8213-201ENSMUST00000118191 441 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm10156-201ENSMUST00000122364 462 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm45384-201ENSMUST00000210451 277 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Gm5781-201ENSMUST00000219792 443 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Lect2-202ENSMUST00000225183 823 ntBASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hmgn3Q9DCB1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hmgn3Q9DCB1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Hmgn3Q9DCB1 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm14928-201ENSMUST00000120198 477 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm11918-201ENSMUST00000121660 179 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm18711-201ENSMUST00000199341 750 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hmgn3Q9DCB1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms