Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm22877-201ENSMUST00000175451 105 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm37981-201ENSMUST00000194280 535 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm6450-201ENSMUST00000200896 574 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm45594-201ENSMUST00000211717 241 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm25517-201ENSMUST00000083865 134 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rrp8Q9DB85 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Gm14219-201ENSMUST00000120414 288 ntBASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.59□□□□□ -0.55
Rrp8Q9DB85 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms