Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.01□□□□□ -0.33
Cfap53Q9D439 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm9136-201ENSMUST00000193368 454 ntBASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm4607-201ENSMUST00000206649 577 ntBASIC13.01□□□□□ -0.33
Cfap53Q9D439 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.01□□□□□ -0.33
Cfap53Q9D439 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Gm43174-201ENSMUST00000195914 2445 ntBASIC13□□□□□ -0.33
Cfap53Q9D439 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13□□□□□ -0.33
Cfap53Q9D439 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Gm45224-201ENSMUST00000208203 414 ntBASIC13□□□□□ -0.33
Cfap53Q9D439 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cfap53Q9D439 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cfap53Q9D439 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Cfap53Q9D439 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13□□□□□ -0.33
Cfap53Q9D439 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cfap53Q9D439 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13□□□□□ -0.33
Cfap53Q9D439 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cfap53Q9D439 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm26083-201ENSMUST00000157904 193 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm27627-201ENSMUST00000183644 150 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm19287-201ENSMUST00000203190 358 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm17812-201ENSMUST00000204935 318 ntBASIC12.99□□□□□ -0.33
Cfap53Q9D439 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.99□□□□□ -0.33
Cfap53Q9D439 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms