Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm12363-201ENSMUST00000122250 668 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm8810-201ENSMUST00000172895 754 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim42Q9D2H5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim42Q9D2H5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim42Q9D2H5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm12813-201ENSMUST00000119615 902 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm28911-201ENSMUST00000188837 117 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms