Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm6082-201ENSMUST00000215204 454 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm17376-201ENSMUST00000166016 84 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm19187-201ENSMUST00000206781 892 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.31□□□□□ -0.6
Shmt2Q9CZN7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms