Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm45930-201ENSMUST00000221330 292 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm10268-201ENSMUST00000085340 555 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 BC043934-202ENSMUST00000185694 2356 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm27892-201ENSMUST00000185017 106 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm8420-201ENSMUST00000097103 598 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hdhd3Q9CYW4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hdhd3Q9CYW4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms