Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Khdc3Q9CWU5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm17376-201ENSMUST00000166016 84 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm25700-201ENSMUST00000177693 110 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm38317-201ENSMUST00000195564 343 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm45224-201ENSMUST00000208203 414 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm13097-201ENSMUST00000210722 397 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc3Q9CWU5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm13296-201ENSMUST00000117854 997 ntBASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm44967-201ENSMUST00000207047 631 ntBASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Khdc3Q9CWU5 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc3Q9CWU5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms