Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpa3Q9CQ71 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Gm6114-201ENSMUST00000182472 968 ntBASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Gm37666-201ENSMUST00000194110 866 ntBASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Gm2553-201ENSMUST00000215986 605 ntBASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Rpa3Q9CQ71 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm23949-201ENSMUST00000104027 127 ntBASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms