Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm43179-201ENSMUST00000198797 275 ntBASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm38199-201ENSMUST00000192013 3277 ntBASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gtf2a1Q99PM3 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Gm38144-201ENSMUST00000192790 465 ntBASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gtf2a1Q99PM3 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms