Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm9192-201ENSMUST00000183221 985 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm18730-201ENSMUST00000218038 343 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Gm5705-201ENSMUST00000066241 711 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tlr3Q99MB1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Gm23200-201ENSMUST00000104379 132 ntBASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tlr3Q99MB1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tlr3Q99MB1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms