Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdha3Q91Y16 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdha3Q91Y16 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm14208-201ENSMUST00000119645 678 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm15610-201ENSMUST00000120584 195 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm27341-201ENSMUST00000183570 106 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Mir7677-201ENSMUST00000184226 67 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdha3Q91Y16 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms