Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm32284-201ENSMUST00000213704 1484 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm6350-201ENSMUST00000195099 1339 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm14848-201ENSMUST00000121850 467 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm24925-201ENSMUST00000178157 107 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm6621-201ENSMUST00000193251 772 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm3544-201ENSMUST00000196129 305 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm42752-201ENSMUST00000198394 1106 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44405-201ENSMUST00000198952 126 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm45865-201ENSMUST00000211815 945 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm18024-201ENSMUST00000218516 690 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 AC154692.1-202ENSMUST00000226632 1231 ntBASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb20Q91XZ9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Tpt1-ps5-201ENSMUST00000112150 516 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm15379-201ENSMUST00000121224 648 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm14006-201ENSMUST00000122132 981 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11871-201ENSMUST00000122429 1061 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm2877-201ENSMUST00000178248 1204 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm8324-201ENSMUST00000178911 1204 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm9553-201ENSMUST00000185703 996 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm7783-201ENSMUST00000204795 781 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
Pcdhb20Q91XZ9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms