Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm8582-201ENSMUST00000164061 789 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm6098-201ENSMUST00000180234 330 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 AC151904.4-201ENSMUST00000219868 1319 ntBASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb3Q91XZ7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Mir686-201ENSMUST00000102174 109 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm11510-201ENSMUST00000120278 347 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm14739-201ENSMUST00000120424 802 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm6047-201ENSMUST00000167221 574 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm37024-201ENSMUST00000192224 868 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.08□□□□□ -0.48
Pcdhb3Q91XZ7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms