Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm11439-201ENSMUST00000118598 409 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 AY036118-201ENSMUST00000200021 923 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm44124-201ENSMUST00000204159 472 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Gm18730-201ENSMUST00000218038 343 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga4Q91XY4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm8913-201ENSMUST00000209491 641 ntBASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga4Q91XY4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga4Q91XY4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms