Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm27023-201ENSMUST00000182372 285 ntBASIC10.18□□□□□ -0.78
Tram1Q91V04 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.18□□□□□ -0.78
Tram1Q91V04 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm20949-201ENSMUST00000206478 952 ntBASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm22058-201ENSMUST00000083393 310 ntBASIC10.18□□□□□ -0.78
Tram1Q91V04 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Mir7023-201ENSMUST00000185093 64 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm37935-201ENSMUST00000192012 982 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm44855-201ENSMUST00000205725 362 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.17□□□□□ -0.78
Tram1Q91V04 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Tram1Q91V04 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tram1Q91V04 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tram1Q91V04 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.16□□□□□ -0.78
Tram1Q91V04 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.16□□□□□ -0.78
Tram1Q91V04 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.16□□□□□ -0.78
Tram1Q91V04 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Tram1Q91V04 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tram1Q91V04 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tram1Q91V04 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.16□□□□□ -0.78
Tram1Q91V04 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms