Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm12314-201ENSMUST00000118104 538 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm9550-201ENSMUST00000161130 862 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm18734-201ENSMUST00000172937 808 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm27552-201ENSMUST00000183351 62 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm27844-201ENSMUST00000183613 62 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm29615-201ENSMUST00000185371 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28224-201ENSMUST00000186078 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm29001-201ENSMUST00000186177 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28292-201ENSMUST00000186593 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28101-201ENSMUST00000187608 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm29076-201ENSMUST00000187689 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28302-201ENSMUST00000187931 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28646-201ENSMUST00000188220 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28205-201ENSMUST00000189177 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm29032-201ENSMUST00000189797 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm28695-201ENSMUST00000190300 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm37448-201ENSMUST00000192795 697 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd2Q8VE28 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nkd2Q8VE28 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm15703-201ENSMUST00000120250 880 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm27627-201ENSMUST00000183644 150 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm3508-201ENSMUST00000186012 792 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm9230-201ENSMUST00000188228 532 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd2Q8VE28 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms