Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm6963-201ENSMUST00000147879 379 ntBASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps39Q8R5L3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm14109-201ENSMUST00000118814 309 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm11700-201ENSMUST00000119409 403 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm19287-201ENSMUST00000203190 358 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm45598-202ENSMUST00000210719 986 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms