Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vopp1Q8R1C3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm18059-201ENSMUST00000208073 580 ntBASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm7525-201ENSMUST00000219425 454 ntBASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vopp1Q8R1C3 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm44323-201ENSMUST00000198689 129 ntBASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm44008-201ENSMUST00000204345 412 ntBASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vopp1Q8R1C3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vopp1Q8R1C3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms