Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm7857-201ENSMUST00000117957 358 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 Mir7677-201ENSMUST00000184226 67 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm18038-201ENSMUST00000197900 485 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 Rps4l-202ENSMUST00000204242 789 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 Gm270-201ENSMUST00000223010 976 ntBASIC11.65□□□□□ -0.54
Treml1Q8K558 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Treml1Q8K558 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Treml1Q8K558 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Treml1Q8K558 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Treml1Q8K558 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Treml1Q8K558 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.65□□□□□ -0.55
Treml1Q8K558 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Treml1Q8K558 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Treml1Q8K558 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Erich3-203ENSMUST00000189969 3460 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Gm25881-201ENSMUST00000157783 103 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Gm4310-201ENSMUST00000177847 889 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.64□□□□□ -0.55
Treml1Q8K558 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Treml1Q8K558 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Treml1Q8K558 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Treml1Q8K558 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Treml1Q8K558 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Treml1Q8K558 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.63□□□□□ -0.55
Treml1Q8K558 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.63□□□□□ -0.55
Treml1Q8K558 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms