Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm23612-201ENSMUST00000103823 110 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm4462-201ENSMUST00000166453 492 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm23576-201ENSMUST00000179918 110 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm13700-201ENSMUST00000118624 1128 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm11993-201ENSMUST00000121861 820 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm26976-201ENSMUST00000182929 908 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm7939-201ENSMUST00000201233 1050 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 BC080696-201ENSMUST00000202858 1218 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm7238-201ENSMUST00000206467 973 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm2594-201ENSMUST00000214774 742 ntBASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx54Q8K4L0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm24943-201ENSMUST00000158329 433 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm27956-201ENSMUST00000175604 260 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm5335-201ENSMUST00000182995 1000 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 AC174797.2-201ENSMUST00000225835 165 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Gm9415-201ENSMUST00000200462 1321 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.42■□□□□ 0.06
Ddx54Q8K4L0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm15197-201ENSMUST00000120526 478 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms