Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm26286-201ENSMUST00000104166 134 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm15808-201ENSMUST00000119046 604 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm14441-201ENSMUST00000121960 540 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm24749-201ENSMUST00000157838 343 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm5616-201ENSMUST00000165252 384 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm8741-201ENSMUST00000174736 384 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.16□□□□□ -0.62
Clrn1Q8K445 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm11660-201ENSMUST00000120955 412 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm28071-201ENSMUST00000190355 478 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm4857-201ENSMUST00000192718 785 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm4157-201ENSMUST00000211647 679 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm5705-201ENSMUST00000066241 711 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.15□□□□□ -0.62
Clrn1Q8K445 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clrn1Q8K445 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.15□□□□□ -0.63
Clrn1Q8K445 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clrn1Q8K445 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clrn1Q8K445 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Clrn1Q8K445 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clrn1Q8K445 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms