Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm3096-201ENSMUST00000185770 364 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm37424-201ENSMUST00000191727 561 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm45880-201ENSMUST00000213041 853 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm30285-201ENSMUST00000214614 422 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
ShfQ8CG80 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ShfQ8CG80 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.53□□□□□ -0.72
ShfQ8CG80 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ShfQ8CG80 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm15004-201ENSMUST00000119192 630 ntBASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm6963-201ENSMUST00000147879 379 ntBASIC10.52□□□□□ -0.73
ShfQ8CG80 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.52□□□□□ -0.73
ShfQ8CG80 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Olfr284-202ENSMUST00000206647 966 ntBASIC10.52□□□□□ -0.73
ShfQ8CG80 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.52□□□□□ -0.73
ShfQ8CG80 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.52□□□□□ -0.73
ShfQ8CG80 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
ShfQ8CG80 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ShfQ8CG80 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms