Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm12857-201ENSMUST00000117678 592 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Gm27552-201ENSMUST00000183351 62 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Gm27844-201ENSMUST00000183613 62 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Gm2553-201ENSMUST00000215986 605 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brf1Q8CFK2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm11700-201ENSMUST00000119409 403 ntBASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf1Q8CFK2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Paupar-201ENSMUST00000194826 3482 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm15515-201ENSMUST00000117827 822 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm12196-201ENSMUST00000120954 262 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm25881-201ENSMUST00000157783 103 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm28937-201ENSMUST00000185413 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm29400-201ENSMUST00000187208 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm28662-201ENSMUST00000188446 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm28251-201ENSMUST00000188835 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm37318-201ENSMUST00000194325 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm38017-201ENSMUST00000194768 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm37287-201ENSMUST00000195449 695 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Gm37793-201ENSMUST00000195548 695 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms