Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf31Q8CCF0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf31Q8CCF0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf31Q8CCF0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf31Q8CCF0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm14441-201ENSMUST00000121960 540 ntBASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm6450-201ENSMUST00000200896 574 ntBASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Matn2-203ENSMUST00000226766 3252 ntBASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf31Q8CCF0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm13916-201ENSMUST00000117368 628 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm15566-201ENSMUST00000121130 590 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Mir7686-201ENSMUST00000200604 57 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prpf31Q8CCF0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms